freud
v2.0.0
Getting Started
Introduction
Installation
Getting Started
Tutorial
Examples
Reference
Query API
Using
freud
Efficiently
Reading Simulation Data for
freud
API
Box Module
Cluster Module
Data Module
Density Module
Environment Module
Interface Module
Locality Module
MSD Module
Order Module
Parallel Module
PMFT Module
Reference
Development Guide
How to cite
freud
References
License
Credits
freud
Docs
»
Index
Edit on GitHub
Index
Symbols
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A
|
B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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X
|
Y
Symbols
-\-COVERAGE
-\-ENABLE-CYTHON
-\-NTHREAD
-\-PRINT-WARNINGS
-\-TBB-INCLUDE
-\-TBB-LINK
-\-TBB-ROOT
-j
A
a1() (freud.data.UnitCell property)
a2() (freud.data.UnitCell property)
a3() (freud.data.UnitCell property)
AABBQuery (class in freud.locality)
angles() (freud.environment.AngularSeparationGlobal property)
(freud.environment.AngularSeparationNeighbor property)
AngularSeparationGlobal (class in freud.environment)
AngularSeparationNeighbor (class in freud.environment)
average (freud.order.Steinhardt attribute)
B
basis_positions() (freud.data.UnitCell property)
bcc() (freud.data.UnitCell class method)
bin_centers (freud.density.CorrelationFunction attribute)
(freud.density.RDF attribute)
(freud.environment.BondOrder attribute)
(freud.pmft.PMFTR12 attribute)
(freud.pmft.PMFTXY attribute)
(freud.pmft.PMFTXYT attribute)
(freud.pmft.PMFTXYZ attribute)
bin_counts() (freud.density.CorrelationFunction property)
(freud.density.RDF property)
(freud.environment.BondOrder property)
(freud.pmft.PMFTR12 property)
(freud.pmft.PMFTXY property)
(freud.pmft.PMFTXYT property)
(freud.pmft.PMFTXYZ property)
bin_edges (freud.density.CorrelationFunction attribute)
(freud.density.RDF attribute)
(freud.environment.BondOrder attribute)
(freud.pmft.PMFTR12 attribute)
(freud.pmft.PMFTXY attribute)
(freud.pmft.PMFTXYT attribute)
(freud.pmft.PMFTXYZ attribute)
bond_order() (freud.environment.BondOrder property)
BondOrder (class in freud.environment)
bounds (freud.density.CorrelationFunction attribute)
(freud.density.RDF attribute)
(freud.environment.BondOrder attribute)
(freud.pmft.PMFTR12 attribute)
(freud.pmft.PMFTXY attribute)
(freud.pmft.PMFTXYT attribute)
(freud.pmft.PMFTXYZ attribute)
Box (class in freud.box)
box (freud.locality.AABBQuery attribute)
(freud.locality.LinkCell attribute)
(freud.locality.NeighborQuery attribute)
(freud.msd.MSD attribute)
box() (freud.data.UnitCell property)
(freud.density.CorrelationFunction property)
(freud.density.GaussianDensity property)
(freud.density.LocalDensity property)
(freud.density.RDF property)
(freud.environment.BondOrder property)
(freud.pmft.PMFTR12 property)
(freud.pmft.PMFTXY property)
(freud.pmft.PMFTXYT property)
(freud.pmft.PMFTXYZ property)
buffer_box() (freud.locality.PeriodicBuffer property)
buffer_ids() (freud.locality.PeriodicBuffer property)
buffer_points() (freud.locality.PeriodicBuffer property)
C
cell_width (freud.locality.LinkCell attribute)
centers() (freud.cluster.ClusterProperties property)
Cluster (class in freud.cluster)
cluster_environments() (freud.environment.EnvironmentCluster property)
cluster_idx() (freud.cluster.Cluster property)
(freud.environment.EnvironmentCluster property)
(freud.order.SolidLiquid property)
cluster_keys() (freud.cluster.Cluster property)
cluster_sizes() (freud.order.SolidLiquid property)
ClusterProperties (class in freud.cluster)
compute (freud.cluster.Cluster attribute)
(freud.cluster.ClusterProperties attribute)
(freud.density.CorrelationFunction attribute)
(freud.density.GaussianDensity attribute)
(freud.density.LocalDensity attribute)
(freud.density.RDF attribute)
(freud.environment.AngularSeparationGlobal attribute)
(freud.environment.AngularSeparationNeighbor attribute)
(freud.environment.BondOrder attribute)
(freud.environment.EnvironmentCluster attribute)
(freud.environment.EnvironmentMotifMatch attribute)
(freud.environment.LocalBondProjection attribute)
(freud.environment.LocalDescriptors attribute)
(freud.interface.Interface attribute)
(freud.locality.PeriodicBuffer attribute)
(freud.locality.Voronoi attribute)
(freud.msd.MSD attribute)
(freud.order.Cubatic attribute)
(freud.order.Hexatic attribute)
(freud.order.Nematic attribute)
(freud.order.RotationalAutocorrelation attribute)
(freud.order.SolidLiquid attribute)
(freud.order.Steinhardt attribute)
(freud.order.Translational attribute)
(freud.pmft.PMFTR12 attribute)
(freud.pmft.PMFTXY attribute)
(freud.pmft.PMFTXYT attribute)
(freud.pmft.PMFTXYZ attribute)
copy (freud.locality.NeighborList attribute)
correlation() (freud.density.CorrelationFunction property)
CorrelationFunction (class in freud.density)
Cubatic (class in freud.order)
cubatic_tensor() (freud.order.Cubatic property)
cube() (freud.box.Box class method)
D
default_query_args (freud.cluster.Cluster attribute)
(freud.density.CorrelationFunction attribute)
(freud.density.LocalDensity attribute)
(freud.density.RDF attribute)
(freud.environment.AngularSeparationNeighbor attribute)
(freud.environment.BondOrder attribute)
(freud.environment.EnvironmentCluster attribute)
(freud.environment.EnvironmentMotifMatch attribute)
(freud.environment.LocalBondProjection attribute)
(freud.environment.LocalDescriptors attribute)
(freud.interface.Interface attribute)
(freud.order.Hexatic attribute)
(freud.order.SolidLiquid attribute)
(freud.order.Steinhardt attribute)
(freud.order.Translational attribute)
(freud.pmft.PMFTR12 attribute)
(freud.pmft.PMFTXY attribute)
(freud.pmft.PMFTXYT attribute)
(freud.pmft.PMFTXYZ attribute)
density() (freud.density.GaussianDensity property)
(freud.density.LocalDensity property)
diameter (freud.density.LocalDensity attribute)
dimensions (freud.box.Box attribute)
dimensions() (freud.data.UnitCell property)
director() (freud.order.Nematic property)
distances (freud.locality.NeighborList attribute)
E
EnvironmentCluster (class in freud.environment)
EnvironmentMotifMatch (class in freud.environment)
F
fcc() (freud.data.UnitCell class method)
filter (freud.locality.NeighborList attribute)
filter_r (freud.locality.NeighborList attribute)
find_first_index (freud.locality.NeighborList attribute)
freud.box (module)
freud.cluster (module)
freud.data (module)
freud.density (module)
freud.environment (module)
freud.interface (module)
freud.locality (module)
freud.msd (module)
freud.order (module)
freud.parallel (module)
freud.pmft (module)
from_arrays() (freud.locality.NeighborList class method)
from_box() (freud.box.Box class method)
from_matrix() (freud.box.Box class method)
from_system() (freud.locality.AABBQuery class method)
(freud.locality.LinkCell class method)
(freud.locality.NeighborQuery class method)
G
GaussianDensity (class in freud.density)
generate_system() (freud.data.UnitCell method)
get_box_vector (freud.box.Box attribute)
get_images (freud.box.Box attribute)
get_num_threads (in module freud.parallel)
global_tensor() (freud.order.Cubatic property)
gyrations() (freud.cluster.ClusterProperties property)
H
Hexatic (class in freud.order)
I
Interface (class in freud.interface)
is2D (freud.box.Box attribute)
K
k (freud.order.Hexatic attribute)
(freud.order.Translational attribute)
L
L (freud.box.Box attribute)
l (freud.order.RotationalAutocorrelation attribute)
(freud.order.SolidLiquid attribute)
(freud.order.Steinhardt attribute)
L_inv (freud.box.Box attribute)
l_max (freud.environment.LocalDescriptors attribute)
largest_cluster_size() (freud.order.SolidLiquid property)
lattice_vectors() (freud.data.UnitCell property)
LinkCell (class in freud.locality)
LocalBondProjection (class in freud.environment)
LocalDensity (class in freud.density)
LocalDescriptors (class in freud.environment)
Lx (freud.box.Box attribute)
Ly (freud.box.Box attribute)
Lz (freud.box.Box attribute)
M
make_absolute (freud.box.Box attribute)
make_fractional (freud.box.Box attribute)
make_random_system() (in module freud.data)
matches() (freud.environment.EnvironmentMotifMatch property)
mode (freud.environment.BondOrder attribute)
(freud.environment.LocalDescriptors attribute)
MSD (class in freud.msd)
msd() (freud.msd.MSD property)
N
n_r() (freud.density.RDF property)
nbins (freud.density.CorrelationFunction attribute)
(freud.density.RDF attribute)
(freud.environment.BondOrder attribute)
(freud.pmft.PMFTR12 attribute)
(freud.pmft.PMFTXY attribute)
(freud.pmft.PMFTXYT attribute)
(freud.pmft.PMFTXYZ attribute)
negative_m (freud.environment.LocalDescriptors attribute)
neighbor_counts (freud.locality.NeighborList attribute)
NeighborList (class in freud.locality)
NeighborQuery (class in freud.locality)
NeighborQueryResult (class in freud.locality)
Nematic (class in freud.order)
nematic_tensor() (freud.order.Nematic property)
nlist() (freud.environment.AngularSeparationNeighbor property)
(freud.environment.LocalBondProjection property)
(freud.environment.LocalDescriptors property)
(freud.locality.Voronoi property)
(freud.order.SolidLiquid property)
normalize_q (freud.order.SolidLiquid attribute)
normed_projections() (freud.environment.LocalBondProjection property)
num_clusters() (freud.cluster.Cluster property)
(freud.environment.EnvironmentCluster property)
num_connections() (freud.order.SolidLiquid property)
num_neighbors() (freud.density.LocalDensity property)
num_sphs() (freud.environment.LocalDescriptors property)
NumThreads (class in freud.parallel)
O
order() (freud.order.Cubatic property)
(freud.order.Nematic property)
(freud.order.RotationalAutocorrelation property)
(freud.order.Steinhardt property)
orientation() (freud.order.Cubatic property)
P
particle_order() (freud.order.Cubatic property)
(freud.order.Hexatic property)
(freud.order.RotationalAutocorrelation property)
(freud.order.Steinhardt property)
(freud.order.Translational property)
particle_tensor() (freud.order.Nematic property)
periodic (freud.box.Box attribute)
periodic_x (freud.box.Box attribute)
periodic_y (freud.box.Box attribute)
periodic_z (freud.box.Box attribute)
PeriodicBuffer (class in freud.locality)
plot (freud.box.Box attribute)
(freud.cluster.Cluster attribute)
(freud.density.CorrelationFunction attribute)
(freud.density.GaussianDensity attribute)
(freud.density.RDF attribute)
(freud.environment.EnvironmentCluster attribute)
(freud.locality.AABBQuery attribute)
(freud.locality.LinkCell attribute)
(freud.locality.NeighborQuery attribute)
(freud.locality.Voronoi attribute)
(freud.msd.MSD attribute)
(freud.order.SolidLiquid attribute)
(freud.order.Steinhardt attribute)
(freud.pmft.PMFTXY attribute)
pmft() (freud.pmft.PMFTR12 property)
(freud.pmft.PMFTXY property)
(freud.pmft.PMFTXYT property)
(freud.pmft.PMFTXYZ property)
PMFTR12 (class in freud.pmft)
PMFTXY (class in freud.pmft)
PMFTXYT (class in freud.pmft)
PMFTXYZ (class in freud.pmft)
point_count() (freud.interface.Interface property)
point_environments() (freud.environment.EnvironmentCluster property)
(freud.environment.EnvironmentMotifMatch property)
point_ids() (freud.interface.Interface property)
point_indices (freud.locality.NeighborList attribute)
points (freud.locality.AABBQuery attribute)
(freud.locality.LinkCell attribute)
(freud.locality.NeighborQuery attribute)
polytopes() (freud.locality.Voronoi property)
projections() (freud.environment.LocalBondProjection property)
Q
q_threshold (freud.order.SolidLiquid attribute)
ql() (freud.order.Steinhardt property)
ql_ij() (freud.order.SolidLiquid property)
query (freud.locality.AABBQuery attribute)
(freud.locality.LinkCell attribute)
(freud.locality.NeighborQuery attribute)
query_point_count() (freud.interface.Interface property)
query_point_ids() (freud.interface.Interface property)
query_point_indices (freud.locality.NeighborList attribute)
R
r_max (freud.density.GaussianDensity attribute)
(freud.density.LocalDensity attribute)
radii_of_gyration() (freud.cluster.ClusterProperties property)
RDF (class in freud.density)
rdf() (freud.density.RDF property)
RotationalAutocorrelation (class in freud.order)
S
sc() (freud.data.UnitCell class method)
scale (freud.order.Cubatic attribute)
seed (freud.order.Cubatic attribute)
segments (freud.locality.NeighborList attribute)
set_num_threads (in module freud.parallel)
sigma (freud.density.GaussianDensity attribute)
sizes() (freud.cluster.ClusterProperties property)
solid_threshold (freud.order.SolidLiquid attribute)
SolidLiquid (class in freud.order)
sph() (freud.environment.LocalDescriptors property)
square() (freud.box.Box class method)
(freud.data.UnitCell class method)
Steinhardt (class in freud.order)
T
t_final (freud.order.Cubatic attribute)
t_initial (freud.order.Cubatic attribute)
to_dict (freud.box.Box attribute)
to_matrix (freud.box.Box attribute)
toNeighborList (freud.locality.NeighborQueryResult attribute)
Translational (class in freud.order)
U
u (freud.order.Nematic attribute)
UnitCell (class in freud.data)
unwrap (freud.box.Box attribute)
V
v1 (freud.box.Box attribute)
v2 (freud.box.Box attribute)
v3 (freud.box.Box attribute)
volume (freud.box.Box attribute)
volumes() (freud.locality.Voronoi property)
Voronoi (class in freud.locality)
W
weighted (freud.order.Steinhardt attribute)
weights (freud.locality.NeighborList attribute)
width (freud.density.GaussianDensity attribute)
wl (freud.order.Steinhardt attribute)
wrap (freud.box.Box attribute)
X
xy (freud.box.Box attribute)
xz (freud.box.Box attribute)
Y
yz (freud.box.Box attribute)
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